BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031F12LP1|AL429444
(1001 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig252 1136 0.0
>3x_Contig252
Length = 1483
Score = 1136 bits (572), Expect = 0.0
Identities = 582/586 (99%)
Strand = Plus / Minus
Query: 1 aaatcagtcttttacaacaattgttacaaagccgtttctttccaacaaataatatctatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 aaatcagtcttttacaacaattgttacaaagccgtttctttccaacaaataatatctatg 527
Query: 61 ttaaatccatgtctagtaacaccagatgcaaatcatagattacccttgcactacctagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ttaaatccatgtctagtaacaccagatgcaaatcatagattacccttgcactacctagtc 467
Query: 121 gagctgacagttaacaggtccaaagaacctcatgtcatagagtattatatggacactata 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gagctgacagtaaacaggtccaaagaacctcatgtcatagagtattatatggacactata 407
Query: 181 ttggatacacttgccaaggaggatgagaaactgctgcgaatgtcactcaatcaccaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ttggatacacttgccaaggaggatgagaaactgctgcgaatgtcactcaatcaccaagat 347
Query: 241 acattgggaaatacccctttacatttagcagccctcaataagaacgttgatttatgccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 acattgggaaatacccctttacatttagcagccctcaataagaacgttgatttatgccag 287
Query: 301 awattagtatatttcggcgcgtcaccagatattcttaacggtgaaaatcagacagtatct 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aaattagtatatttcggcgcgtcaccagatattcttaacggtgaaaatcagacagtatct 227
Query: 361 atgatactgtctcgtttcacagttccaaatatatttcaaccaacgcttcctgcccagatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 atgatactgtctcgtttcacagttccaaatatatttcaaccaacgcttcctgcccagatt 167
Query: 421 ctacaatctccacccaagacaactttcttggcgaacactcctcgaaacagtcaagaagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ctacaatctccacccaagacaactttcttggcgaacactcctcgaaacagtcaagaagag 107
Query: 481 cgtatagatgacaccagcyaatacgacttcaatgacaccacagtggatagtatacagact 540
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 cgtatagatgacaccagcaaatacgacttcaatgacaccacagtggatagtatacagact 47
Query: 541 tcaactaggaaaaacaacatagtcgaccgttacgatgtcttatcaa 586
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 46 tcaactaggaaaaacaacatagtcgaccgtaacgatgtcttatcaa 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7340
Number of Sequences: 1807
Number of extensions: 7340
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 1001
length of database: 10,358,551
effective HSP length: 16
effective length of query: 985
effective length of database: 10,329,639
effective search space: 10174694415
effective search space used: 10174694415
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)